Bioprocess Optimization Based On Relevance Vector Regression Models and Evolutionary Programming Technique
Authors: R. Simutis, V. Galvanauskas, D. Levisauskas, J. Repsyte
Abstract:
This paper proposes a bioprocess optimization procedure based on Relevance Vector Regression models and evolutionary programming technique. Relevance Vector Regression scheme allows developing a compact and stable data-based process model avoiding time-consuming modeling expenses. The model building and process optimization procedure could be done in a half-automated way and repeated after every new cultivation run. The proposed technique was tested in a simulated mammalian cell cultivation process. The obtained results are promising and could be attractive for optimization of industrial bioprocesses.
Keywords: Bioprocess optimization, Evolutionary programming, Relevance Vector Regression.
Digital Object Identifier (DOI): doi.org/10.5281/zenodo.1092289
Procedia APA BibTeX Chicago EndNote Harvard JSON MLA RIS XML ISO 690 PDF Downloads 2202References:
[1] J. H. Nielsen, J. Villadsen, G. Lidén, Bioreaction Engineering Principles, Kluwer Academic/Plenum Publishers, New York, 2003.
[2] B. Xu, M. Jahic, S.-O. Enfors, "Modeling of Overflow Metabolism in Batch and Fed-Batch Cultures of Escherichia coli,” Biotechnology Progress 15, 1999, pp.81-90.
[3] B. Sonnleitner, "Measurement, monitoring, modelling and control,” inBasic Biotechnology, 3rd ed., C. Ratledge, B. Kristiansen (eds). Cambridge University Press, 2006, pp. 251-270.
[4] M. L. Thompson, M. A. Kramer, "Modeling chemical processes using prior knowledge and neural networks,” AIChE Journal 40 (8), 1994, pp. 1328-1340.
[5] J. Schubert, R. Simutis, M. Dors, I. Havlik, A. Lübbert, "Bioprocess optimization and control: Application of hybrid modelling,” Journal of Biotechnology 35, 1994, pp. 51-68.
[6] S. Gnoth, R. Simutis, A. Lübbert, "Selective expression of the soluble product fraction in Escherichia coli cultures employed in recombinant protein production processes,” Applied Microbiology and Biotechnology 87 (6), 2010, pp. 2047-2058.
[7] J. Peres, R. Oliveira, S. F. de Azevedo, "Bioprocess hybrid parametric/nonparametric modelling based on the concept of mixture of experts,” Biochemical Engineering Journal 39 (1), 2008, pp. 190-206.
[8] P. Kadlec, B. Gabrys, S. Strandt,"Data-driven soft sensors in the process industry,” Comput. Chem. Eng., vol. 33, 2009, pp. 795–814.
[9] C. M. Bishop, "Pattern recognition and machine learning,” Springer, 2006.
[10] M. E. Tipping, "Sparse Bayesian Learning and the Relevance Vector Machine,” Journal of Machine Learning Research 1, 2001, pp. 211–244.
[11] SparseBayes Version 2.0 software package for Matlab, 2013, http://www.relevancevector.com.
[12] D. J. Fogel, "Evolutionary Computation: toward a new philosophy of machine intelligence,” IEEE Press, New York, 1995.
[13] M. Aehle, K. Bork, S. Schaepe, A. Kuprijanov, R. Horstkorte, R.Simutis, A. Lübbert, "Increasing batch-to-batch reproducibility of CHO-cell cultures using a model predictive control approach,” Cytotechnology. Dordrecht : Springer. ISSN 0920-9069, 2012, Vol. 64, iss. 6, pp. 623-634.