Performance Evaluation of Wavelet Based Coders on Brain MRI Volumetric Medical Datasets for Storage and Wireless Transmission
Commenced in January 2007
Frequency: Monthly
Edition: International
Paper Count: 32807
Performance Evaluation of Wavelet Based Coders on Brain MRI Volumetric Medical Datasets for Storage and Wireless Transmission

Authors: D. Dhouib, A. Naït-Ali, C. Olivier, M. S. Naceur

Abstract:

In this paper, we evaluate the performance of some wavelet based coding algorithms such as 3D QT-L, 3D SPIHT and JPEG2K. In the first step we achieve an objective comparison between three coders, namely 3D SPIHT, 3D QT-L and JPEG2K. For this purpose, eight MRI head scan test sets of 256 x 256x124 voxels have been used. Results show superior performance of 3D SPIHT algorithm, whereas 3D QT-L outperforms JPEG2K. The second step consists of evaluating the robustness of 3D SPIHT and JPEG2K coding algorithm over wireless transmission. Compressed dataset images are then transmitted over AWGN wireless channel or over Rayleigh wireless channel. Results show the superiority of JPEG2K over these two models. In fact, it has been deduced that JPEG2K is more robust regarding coding errors. Thus we may conclude the necessity of using corrector codes in order to protect the transmitted medical information.

Keywords: Image coding, medical imaging, wavelet basedcoder, wireless transmission.

Digital Object Identifier (DOI): doi.org/10.5281/zenodo.1056769

Procedia APA BibTeX Chicago EndNote Harvard JSON MLA RIS XML ISO 690 PDF Downloads 1901

References:


[1] D. Tzovaras, N. Grammalidis, M.G. Strintzis and S. Malassiotis, « Coding for the storage and communication of visualisations of 3D medical data », Signal Processing : Image Communication, Vol. 13, pp. 65-78, 1998.
[2] S.-G. Miaou, S.-T. Chen, "Automatic Quality Control for Wavelet- Based Compression of Volumetric Medical Images Using Distortion- Constrained Adaptative Vector Quantization", IEEE Trans. on Medical Images Using Distortion-Constrained Adaptative Vector Quantization", Vol. 23, No 11, Nov. 2004.
[3] L.W.C. Chan, M.Z. Zhou, S.K. Hau, M.Y.Y. Law, F.H. Tang and J. Documet, "International Internet-2 performance and automatic tuning protocol for medical imaging applications", Computerized Medical Imaging and Graphics, Vol. 29, pp. 103-114, 2005.
[4] X. Qi and J.M. Tyler, "A progressive transmission capable diagnostically lossless compression scheme for 3D medical image sets, Information Sciences, Vol. 175, pp. 217-243, 2005.
[5] B. Ramakrishnan and N. Sriraam, "Internet transmission of DICOM images with effective low bandwidth utilization", Digital Signal Processing, Vol. 16, pp. 825-831, 2006.
[6] J. M. Shapiro, "Embedded image coding using zerotrees of wavelet coefficients," IEEE Trans. Signal Processing, vol. 41, pp. 3445-3462, 1993.
[7] K.R. Namuduri and V.N. Ramaswamy, "Feature preserving image compression", Patter Recognition Letters, Vol. 24, pp. 2767-2776, 2003.
[8] A. Said and W. Pearlman, "A new fast and efficient image codec based on set partitioning in hierarchical trees," IEEE Trans. Circuits Syst. Video Technol., vol. 6, pp. 243-250, June 1996.
[9] M. Penedo, W.A. Pearlman, P.G. Tahoces, M. Souto and J.J. Vidal, "Region-Based Wavelet Coding Methods for Digital Mammography", IEEE Trans. on Medical Imaging, Vol. 22, No. 10, pp. 1288-1296, Oct. 2003.
[10] W.A. Pearlman, A. Islam, N. Nagaraj and A.Said, "Efficient, lowcomplexity image coding with a set-partitioning embedded block coder", IEEE Trans. Circuits and Syst. Video Technol., Vol 14, No 11, pp. 1219 - 1235, Nov. 2004.
[11] D. Taubman, "High performance scalable image compression with EBCOT", IEEE Trans. on Image Processing, vol. 9, No. 7, pp. 1158-70, Jun 2000.
[12] C. Christopoulos, A. Skodras andT. Ebrahimi, "The JPEG2000 Still iimage coding system: An overview", IEEE Trans. on Consumer Electronics, Vol. 46, No. 4, pp. 1103-1127, Nov. 2000.
[13] N. Thomos, N. V. Boulgouris and M. G. Strintzis, "Optimized Transmission of JPEG2000 streams over wireless channels", IEEE Trans. on Image Processing, vol. 15, No1, pp. 54-67, Jan 2006.
[14] K. Krishnan, M.W. Marcellin, A. Bilgin and M.S. Nadar, "Efficient Transmission of Compressed Data for Remote Volume Visualization", IEEE Trans. on Medical Imaging, Vol. 25, No. 9, pp. 1189-1199, Sep. 2006
[15] Y. Zhang, B.T. Pham and M. P. Eckstein, "Automated Optimization of JPEG2000 Encoder Options Based on Model Observer Performance for Detecting Variable Signals in X-Ray Coronary Angiograms", IEEE Trans. on Medical Imaging, Vol. 23, No 4, pp. 459-474, April 2004.
[16] P. Schelkens, A. Munteanu, J. Barbarien, G. Mihneai, X. Giro-Nieto and J. Cornellis, " Wavelet coding of volumetric medical datasets" , IEEE Trans. on Medical Imaging, vol. 22, No3, pp. 441-458, March 2003.
[17] A. Munteanu, "Wavelet Image Coding and Multiscale Edge Detection Algorithms and Applications", Ph.D dissertation, Vrije Univ. Brussel, Brussels, Belgium, 2003.
[18] G. Menegaz and J.-P. Thiran, "Lossy to Lossless Object-Based Coding of 3-D MRI Data" , IEEE Trans. on Image Processing, vol.11, Septembre 2002.
[19] G. Menegaz and J.-P. Thiran, "Three-Dimensional Encoding/Two- Dimensional Decoding of Medical Data", IEEE trans. on Medical Imaging, vol. 22, no 3, March 2003.
[20] Y.S. Kim and W.A. Pearlman, "Stripe-based SPIHT compression of volumetric medical images for low memory usage and uniform reconstruction quality", in Proc ICASSP, vol 4, Jun. 2000, pp. 2031- 2034.
[21] Z. Xiong, X. Wu, S. Cheng and J. Hua, "Lossy-to-Lossless Compression of Medical volumetric Data Using Three-dimensional Integer Wavelet Transforms", IEEE Trans. on MedicalImaging, vol.22, No3, pp. 459- 470, March 2003.
[22] M. G. Strintzis, "A review of compression methods for medical images in PACS", International Journal of Medical Informatics, Vol. 52, No1, pp. 159-165, Oct. 1998.
[23] P. J. Klutke, P. Mattioli, F. Baruffaldi, A. Toni and K.-H. Englemeier, "The Telemedicine benchmarkÔÇöa general tool to measure and compare the performance of video conferencing equipment in the telemedicine area", Computer Methods and Programs in Biomedicine, Vol. 60, no 2, pp. 133-141, 1999.
[24] C.N. Doukas, I. Maglogiannis and G. Kormentzas, "Medical Image Compression using wavelet Transform on Mobile Devices with ROI coding support", 27th Annual International Conference of the Engineering in Medicine and Biology Society, IEEE-EMBS 2005, pp. 3779-3784.
[25] J.H. Kim and J.K. Lee, " Capture Effects of Wireless CSMA/CA Protocols in Rayleigh and Shadow Fading Channels", IEEE Trans. on Vehicular Technology, Vol. 48, No. 4, pp. 1277-1286, July 1999.
[26] D. Wang, Y. Zhou, P. Su and J. Wang, "Robust Progressive Image Transmission Over Rayleigh Fading Channels", International Conference on Communication Technology Proceedings, 2003. ICCT 2003, Vol. 2, No. 9-11, pp. 846 - 849, April 2003.
[27] L.C. Ramac, "Performance of the Wavelet Domain Diversity Method for Image Transmission over Rayleigh Fading Channels", 2000 IEEE International Conference on Personal Wireless Communications, pp. 543 547, 2000.
[28] A. Naït-Ali and C. Cavaro-Ménard, «Compression des images et des signaux médicau x », Hermes Science Publications, Fev 2007.
[29] N. Thomos, N.V. Boulgouris and M.G.Strintzis, "Wireless image transmission using turbo codes and optimal unequal error protection", Vol. 14, No. 11, 2005. International Conference on Image Processing ICIP 2003. Proceedings, Vol. 1, No. 14-17, pp. 73-76,2003.
[30] Medical Database for the Evaluation of Image and Signal processing (MeDEISA), http://www.istia.univangers. fr/LISA_MeDEISA/IEEE_FRANCE_EMB/
[31] E. Kofidis, N. Kolokotronis, A. Vassilarakou, S. Theodoridis and D. Cavouras, "Wavelet-based medical image compression", Future Generation Computer Systems, vol 15, No2, pp. 223-243, March 1999.
[32] M. Barlaud, "Compression et codage des images et des videos", Hermes 2002.
[33] Y. Gaudeau, "Contributions en compression d-images médicales 3D et d-images naturelles 2D", Ph.D dissertation, Henri poincaré Univ., Nancy, France, 2006.
[34] American College of Radiology (ACR), "ACR technical standard for teleradiology", ACR Practice Guideline, pp. 801-810, Oct. 2005, www.acr.org.
[35] Erickson B.J, "Irreversible compression of medical images", Journal of Digital Imaging, vol. 15, no 1, pp. 5-14, March 2002.
[36] A.S. Tolba, "Wavelet Packet Compression of Mediacl Images", Digital Signal Processing, Vol. 12, pp. 441-470, 2002.