@article{(Open Science Index):https://publications.waset.org/pdf/10985,
	  title     = {An Improved Fast Search Method Using Histogram Features for DNA Sequence Database},
	  author    = {Qiu Chen and  Feifei Lee and  Koji Kotani and  Tadahiro Ohmi},
	  country	= {},
	  institution	= {},
	  abstract     = {In this paper, we propose an efficient hierarchical DNA
sequence search method to improve the search speed while the
accuracy is being kept constant. For a given query DNA sequence,
firstly, a fast local search method using histogram features is used as a
filtering mechanism before scanning the sequences in the database.
An overlapping processing is newly added to improve the robustness
of the algorithm. A large number of DNA sequences with low
similarity will be excluded for latter searching. The Smith-Waterman
algorithm is then applied to each remainder sequences. Experimental
results using GenBank sequence data show the proposed method
combining histogram information and Smith-Waterman algorithm is
more efficient for DNA sequence search.},
	    journal   = {International Journal of Biomedical and Biological Engineering},
	  volume    = {4},
	  number    = {9},
	  year      = {2010},
	  pages     = {696 - 699},
	  ee        = {https://publications.waset.org/pdf/10985},
	  url   	= {https://publications.waset.org/vol/45},
	  bibsource = {https://publications.waset.org/},
	  issn  	= {eISSN: 1307-6892},
	  publisher = {World Academy of Science, Engineering and Technology},
	  index 	= {Open Science Index 45, 2010},
	}