3D Liver Segmentation from CT Images Using a Level Set Method Based on a Shape and Intensity Distribution Prior
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3D Liver Segmentation from CT Images Using a Level Set Method Based on a Shape and Intensity Distribution Prior

Authors: Nuseiba M. Altarawneh, Suhuai Luo, Brian Regan, Guijin Tang

Abstract:

Liver segmentation from medical images poses more challenges than analogous segmentations of other organs. This contribution introduces a liver segmentation method from a series of computer tomography images. Overall, we present a novel method for segmenting liver by coupling density matching with shape priors. Density matching signifies a tracking method which operates via maximizing the Bhattacharyya similarity measure between the photometric distribution from an estimated image region and a model photometric distribution. Density matching controls the direction of the evolution process and slows down the evolving contour in regions with weak edges. The shape prior improves the robustness of density matching and discourages the evolving contour from exceeding liver’s boundaries at regions with weak boundaries. The model is implemented using a modified distance regularized level set (DRLS) model. The experimental results show that the method achieves a satisfactory result. By comparing with the original DRLS model, it is evident that the proposed model herein is more effective in addressing the over segmentation problem. Finally, we gauge our performance of our model against matrices comprising of accuracy, sensitivity, and specificity.

Keywords: Bhattacharyya distance, distance regularized level set (DRLS) model, liver segmentation, level set method.

Digital Object Identifier (DOI): doi.org/10.5281/zenodo.1110225

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References:


[1] S. Luo, X. Li, and J. Li, "Review on the Methods of Automatic Liver Segmentation from Abdominal Images," Journal of Computer and Communications, vol. 2, p. 1, 2014.
[2] R. Adams and L. Bischof, "Seeded region growing," Pattern Analysis and Machine Intelligence, IEEE Transactions on, vol. 16, pp. 641-647, 1994.
[3] A. Beck and V. Aurich, "Hepatux–a semiautomatic liver segmentation system," 3D Segmentation in The Clinic: A Grand Challenge, pp. 225-233, 2007.
[4] R. Pohle and K. D. Toennies, "Segmentation of medical images using adaptive region growing," in Medical Imaging 2001, 2001, pp. 1337-1346.
[5] K. J. Mortelé, V. Cantisani, R. Troisi, B. de Hemptinne, and S. G. Silverman, "Preoperative liver donor evaluation: imaging and pitfalls," Liver Transplantation, vol. 9, pp. S6-S14, 2003.
[6] S. Kumar, R. Moni, and J. Rajeesh, "Automatic liver and lesion segmentation: a primary step in diagnosis of liver diseases," Signal, Image and Video Processing, vol. 7, pp. 163-172, 2013.
[7] C. Platero, J. M. Poncela, P. Gonzalez, M. C. Tobar, J. Sanguino, G. Asensio, et al., "Liver segmentation for hepatic lesions detection and characterisation," in Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, 2008, pp. 13-16.
[8] D. A. B. Oliveira, R. Q. Feitosa, and M. M. Correia, "Liver Segmentation using Level Sets and Genetic Algorithms," in VISAPP (2), 2009, pp. 154-159.
[9] H. Yang, Y. Wang, J. Yang, and Y. Liu, "A novel graph cuts based liver segmentation method," in Medical Image Analysis and Clinical Applications (MIACA), 2010 International Conference on, 2010, pp. 50-53.
[10] Y.-W. Chen, K. Tsubokawa, and A. H. Foruzan, "Liver segmentation from low contrast open MR scans using k-means clustering and graph-cuts," in Advances in Neural Networks-ISNN 2010, ed: Springer, 2010, pp. 162-169.
[11] A. H. Foruzan, C. Yen-Wei, R. A. Zoroofi, A. Furukawa, H. Masatoshi, and N. TOMIYAMA, "Segmentation of Liver in Low-Contrast Images Using K-Means Clustering and Geodesic Active Contour Algorithms," IEICE TRANSACTIONS on Information and Systems, vol. 96, pp. 798-807, 2013.
[12] J. Liu and J. K. Udupa, "Oriented active shape models," Medical Imaging, IEEE Transactions on, vol. 28, pp. 571-584, 2009.
[13] N. M. Altarawneh, S. Luo, B. Regan, and C. Sun, "A modified distance reguularized level set model forl liver segmentation from CT images," Signal & Image Processing, vol. 6, p. 1, 2015.
[14] T. Heimann, I. Wolf, and H.-P. Meinzer, "Active shape models for a fully automated 3D segmentation of the liver–an evaluation on clinical data," in Medical Image Computing and Computer-Assisted Intervention– MICCAI 2006, ed: Springer, 2006, pp. 41-48.
[15] M. Erdt, S. Steger, M. Kirschner, and S. Wesarg, "Fast automatic liver segmentation combining learned shape priors with observed shape deviation," in Computer-Based Medical Systems (CBMS), 2010 IEEE 23rd International Symposium on, 2010, pp. 249-254.
[16] H. Badakhshannoory and P. Saeedi, "A model-based validation scheme for organ segmentation in CT scan volumes," Biomedical Engineering, IEEE Transactions on, vol. 58, pp. 2681-2693, 2011.
[17] W. Huang, Z. Tan, Z. Lin, G. Huang, J. Zhou, C. Chui, et al., "A semi-automatic approach to the segmentation of liver parenchyma from 3D CT images with Extreme Learning Machine," in Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE, 2012, pp. 3752-3755.
[18] S. Luo, Q. Hu, X. He, J. Li, J. S. Jin, and M. Park, "Automatic liver parenchyma segmentation from abdominal CT images using support vector machines," in Complex Medical Engineering, 2009. CME. ICME International Conference on, 2009, pp. 1-5.
[19] S. Luo, X. Li, and J. Li, "Improvement of Liver Segmentation by Combining High Order Statistical Texture Features with Anatomical Structural Features," Engineering, vol. 5, p. 67, 2013.
[20] N. M. Altarawneh, S. Luo, B. Regan, C. Sun, and F. Jia, "global threshold and region-based active contour model for accurate image segmentation."
[21] N. M. Altarawneh and B. Regan, "A novel global threshold-based active contour model," Computer Science, 2014.
[22] C. Xu, d. l.pham, and j. l.prince, "Medical Image Segmentation Using Deformable Models," in SPIE Handbook on Medical Imaging vol. 3, J. M. Fitzpatrick and M. Sonka, Eds., ed, 2000, pp. 129-174.
[23] C. Li, C. Xu, C. Gui, and M. D. Fox, "Distance regularized level set evolution and its application to image segmentation," Image Processing, IEEE Transactions on, vol. 19, pp. 3243-3254, 2010.
[24] V. Caselles, R. Kimmel, and G. Sapiro, "Geodesic active contours," International journal of computer vision, vol. 22, pp. 61-79, 1997.
[25] D. Freedman and T. Zhang, "Active contours for tracking distributions," Image Processing, IEEE Transactions on, vol. 13, pp. 518-526, 2004.
[26] T. Georgiou, O. Michailovich, Y. Rathi, J. Malcolm, and A. Tannenbaum, "Distribution metrics and image segmentation," Linear algebra and its applications, vol. 425, pp. 663-672, 2007.
[27] Y. Rathi, O. Michailovich, J. Malcolm, and A. Tannenbaum, "Seeing the unseen: Segmenting with distributions," in International conference on signal and image processing, 2006.
[28] T. Zhang and D. Freedman, "Tracking objects using density matching and shape priors," in Computer Vision, 2003. Proceedings. Ninth IEEE International Conference on, 2003, pp. 1056-1062.
[29] I. B. Ayed, S. Li, and I. Ross, "A statistical overlap prior for variational image segmentation," International journal of computer vision, vol. 85, pp. 115-132, 2009.
[30] D. Cremers, N. Sochen, and C. Schnörr, "Towards recognition-based variational segmentation using shape priors and dynamic labeling," in Scale Space Methods in Computer Vision, 2003, pp. 388-400.